SubtiBank SubtiBank
Version comparison:

2018-02-10T11:39:08.000Z2025-04-07 08:39:27

description

similar to reticuline oxidase

uncharacterized FAD-linked oxidoreductase

locus

BSU08800

BSU_08800

proteinLength

367

451

geneLength

1101

1356

outlinks

bsu

BSU08800

BSU_08800

Gene

Coordinates

957,705 → 959,060

957,705 959,060

The protein

Protein family

FAD-binding PCMH-type domain (according to Swiss-Prot)

oxygen-dependent FAD-linked oxidoreductase family (with [[protein|YitY]] and [[protein|CotQ]], according to UniProt)

The protein

Paralogous protein(s)

[[protein|CotQ]] (40%)

[[this]]

Biological materials

Mutant

MGNA-A246 (ygaK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/246 NBRP B. subtilis, Japan]

BKE08800 (Δ[[gene|ygaK]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACTCCCACATCTCTTTC, downstream forward: _UP4_TAAAAAAATGAAGATGGAGC

BKK08800 (Δ[[gene|ygaK]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACTCCCACATCTCTTTC, downstream forward: _UP4_TAAAAAAATGAAGATGGAGC

MGNA-A246 (ygaK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/246 NBRP B. subtilis, Japan]

BKE08800 ([[gene|ygaK]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACTCCCACATCTCTTTC, downstream forward: _UP4_TAAAAAAATGAAGATGGAGC

BKK08800 ([[gene|ygaK]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACTCCCACATCTCTTTC, downstream forward: _UP4_TAAAAAAATGAAGATGGAGC

The protein

[SW|Domains]

[SW|FAD-binding PCMH-type domain] (aa 29-204) (according to UniProt)

The protein

[SW|Cofactors]

FAD (according to UniProt)